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Mathematica for Bioinformatics, George Mias


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Автор: George Mias
Название:  Mathematica for Bioinformatics
ISBN: 9783030101923
Издательство: Springer
Классификация:


ISBN-10: 3030101924
Обложка/Формат: Soft cover
Страницы: 384
Вес: 0.61 кг.
Дата издания: 2018
Язык: English
Издание: Softcover reprint of
Иллюстрации: 120 tables, color; 156 illustrations, color; 19 illustrations, black and white; xvi, 384 p. 175 illus., 156 illus. in color.
Размер: 234 x 213 x 20
Читательская аудитория: Professional & vocational
Основная тема: Life Sciences
Подзаголовок: A Wolfram Language Approach to Omics
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: This book offers a comprehensive introduction to using Mathematica and the Wolfram Language for Bioinformatics. The chapters build gradually from basic concepts and the introduction of the Wolfram Language and coding paradigms in Mathematica, to detailed worked examples derived from typical research applications using Wolfram Language code. The coding examples range from basic sequence analysis, accessing genomic databases, differential gene expression, and machine learning implementations to time series analysis of longitudinal omics experiments, multi-omics integration and building dynamic interactive bioinformatics tools using the Wolfram Language. The topics address the daily bioinformatics needs of a broad audience: experimental users looking to understand and visualize their data, beginner bioinformaticians acquiring coding expertise in providing biological research solutions, and practicing expert bioinformaticians working on omics who wish to expand their toolset to include the Wolfram Language.
Дополнительное описание: 1 Introduction to Bioinformatics.- 2. A Mathematica Primer for Bioinformaticians.- 3. Statistics for Genomic Analysis.- 4. Genomic Sequences.- 5. Databases.- 6. Transcriptomics.- 7. Proteomics.- 8. Metabolomics.- 9. Systems Biology.- 10. Networks.- 11. Ti



Principles of Computational Cell Biology

Автор: Helms, Volkhard
Название: Principles of Computational Cell Biology
ISBN: 3527333584 ISBN-13(EAN): 9783527333585
Издательство: Wiley
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Цена: 11880.00 р.
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Описание: This successful text, now in its 2nd ed. , provides an ideal introduction into the possibilities of modeling on a cell biology level. It extends the strengths of the first edition even further while keeping faithful to the trusted hands-on concept and keeping math to the minimum.

Автор: Neufeld Zoltan
Название: Introduction To Systems Biology: Mathematical And Computational Modeling Of The Cell
ISBN: 1848169019 ISBN-13(EAN): 9781848169012
Издательство: World Scientific Publishing
Цена: 10296.00 р.
Наличие на складе: Поставка под заказ.

Описание: This book is a comprehensive guide to applications of mathematical and computational approaches to cell biology. It provides an accessible entry route into this interdisciplinary field for students and researchers from various specialized backgrounds in biology, mathematics, physics, engineering or computer science. It gives a balanced presentation of the methodology (differential equations, dynamical systems analysis, stochastic processes, networks and optimization) and new, emerging modeling approaches, illustrated through a structured collection of case studies in which the use of mathematical and computational methods combined with experiments leads to new insights into the biological phenomena. At the end of each chapter, this is complemented with a brief overview of the relevant systems biology literature, providing links to reviews and key research publications in the particular area for further reading. In addition to the modeling approaches, the book also describes the relevant mathematical and systems biology software tools, including a set of problems and computational exercises through which the reader can gain a practical knowledge of the wide range of computational tools and model databases currently available.

Mathematical Modeling in Nutrition and the Health Sciences

Автор: Janet A. Novotny; Michael H. Green; Ray C. Boston
Название: Mathematical Modeling in Nutrition and the Health Sciences
ISBN: 1461347599 ISBN-13(EAN): 9781461347590
Издательство: Springer
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Цена: 27950.00 р.
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International Handbook of Mathematical Learning Difficulties

Автор: Annemarie Fritz; Vitor Geraldi Haase; Pekka R?s?ne
Название: International Handbook of Mathematical Learning Difficulties
ISBN: 3319971476 ISBN-13(EAN): 9783319971476
Издательство: Springer
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Цена: 34937.00 р.
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Описание: This comprehensive volume provides teachers, researchers and education professionals with cutting edge knowledge developed in the last decades by the educational, behavioural and neurosciences, integrating cognitive, developmental and socioeconomic approaches to deal with the problems children face in learning mathematics.The neurocognitive mechanisms and the cognitive processes underlying acquisition of arithmetic abilities and their significance for education have been the subject of intense research in the last few decades, but the most part of this research has been conducted in non-applied settings and there’s still a deep discrepancy between the level of scientific knowledge and its implementation into actual educational settings. Now it’s time to bring the results from the laboratory to the classroom. Apart from bringing the theoretical discussions to educational settings, the volume presents a wide range of methods for early detection of children with risks in mathematics learning and strategies to develop effective interventions based on innovative cognitive test instruments. It also provides insights to translate research knowledge into public policies in order to address socioeconomic issues. And it does so from an international perspective, dedicating a whole section to the cultural diversity of mathematics learning difficulties in different parts of the world. All of this makes the International Handbook of Mathematical Learning Difficulties an essential tool for those involved in the daily struggle to prepare the future generations to succeed in the global knowledge society.

Mathematica for Bioinformatics

Автор: Mias
Название: Mathematica for Bioinformatics
ISBN: 3319723766 ISBN-13(EAN): 9783319723761
Издательство: Springer
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Цена: 25155.00 р.
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Описание:

1 Introduction to Bioinformatics

1.1 Principles of Genomics

1.2 Beyond the Genomes: Multiple Omics

1.3 Systems and Networks

1.4 Bioinformatics in modern genetics

2. A Mathematica Primer for Bioinformaticians

2.1 Getting Started

2.2 Variables

2.3 Lists

2.4 Functions

2.4 Importing and Exporting Data

2.5 Graphics

2.6 Associations and Query

2.7 Wolfram Alpha

2.8 Wolfram Language Resources

3. Statistics for Genomic Analysis

3.1 Probability

3.2 Distributions

3.3 Hypotheses

3.4 Parametric Testing

3.5 Non-parametric Testing

3.6 Markov Chains

3.7 Exploratory Data Analysis

4. Genomic Sequences

4.1 Sequence Alignments

4.2 Pairwise Alignment

4.3 Dynamic Programming

4.4 Processing Sequencing Files

5. Databases

5.1 Connecting to Databases

5.2 UCSC Browser and MySQL

5.3 Gene Ontology Annotations

5.4 Biological Pathways

5.5 Genomic Medicine Data Sources

6. Transcriptomics

6.1 Transcriptomic Data

6.2 Quality Control

6.3 Normalization

6.4 Differential Gene Expression

6.5 Visualization

6.6 Classification and Biological Significance

7. Proteomics

7.1 Proteomics Data

7.2 Spectral Visualization

7.3 Quality Control

7.4 Normalization

7.5 Differential Protein Expression

7.6 Visualization

8. Metabolomics

8.1 Metabolomics Data

8.2 Metabolomics Databases

8.3 Metabolomics Data Analysis

8.4 Putative Identification of Compounds

8.5 Clustering and Principal Co

mponents Analysis

9. Systems Biology

9.1 Introduction to Systems Biology

9.2 Basic Models

9.3 Visualization of Data

9.4 Beyond Basic Models

10. Networks

10.1 Introduction to Network Analysis

10.2 Basic Network Construction

10.3 Network Properties

10.4 Network Comparison

10.5 Scale Free Networks

11. Time Series Analysis

11.1 Introduction to Time Series

11.2 Regularly Sampled Time Series

11.3 Frequency Representation of Longitudinal Data

11.4 Uneven Sampling

12. Omics Integration and Systems Medicine

12.1 Introduction to Multiple Omics Integration

12.2 Systems Medicine Approaches

12.3 Example Integration of Omics Datasets

13. Bioinformatics Development with Mathematica

13.1 Introduction to Pa

ckages

13.2 Creating a Simple Bioinformatics Package

13.3 Dynamics, Manipulate and Interactive Interfaces

Theory and Mathematical Methods in Bioinformatics

Автор: Shiyi Shen
Название: Theory and Mathematical Methods in Bioinformatics
ISBN: 3642094295 ISBN-13(EAN): 9783642094293
Издательство: Springer
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Цена: 23508.00 р.
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Описание: This monograph addresses, in a systematic and pedagogical manner, the mathematical methods and the algorithms required to deal with the molecularly based problems of bioinformatics.

Mathematical Morphology and Its Application to Signal and Image Processing

Автор: Michael H. F. Wilkinson; Jos B.T.M. Roerdink
Название: Mathematical Morphology and Its Application to Signal and Image Processing
ISBN: 3642036120 ISBN-13(EAN): 9783642036125
Издательство: Springer
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Цена: 9781.00 р.
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Описание: The 9th ISMM conference covered a very diverse collection of papers, bound together by the central themes of mathematical morphology, namely, the tre- ment of images in terms of set and lattice theory.

Invasive Species

Автор: Robinson
Название: Invasive Species
ISBN: 052176596X ISBN-13(EAN): 9780521765961
Издательство: Cambridge Academ
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Цена: 16315.00 р.
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Описание: Biosecurity regulators are charged with protecting national environments, agricultural interests and economies on tight budgets, while supporting trade. Focusing on surveillance, statistical modelling, decision making and communication, this book presents tested scientific solutions to the greatest challenges faced by biosecurity regulators today.

Mathematical and Statistical Developments of Evolutionary Theory

Автор: S. Lessard
Название: Mathematical and Statistical Developments of Evolutionary Theory
ISBN: 9401067171 ISBN-13(EAN): 9789401067171
Издательство: Springer
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Цена: 12157.00 р.
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Описание: Proceedings of the NATO Advanced Study Institute and Seminaire de mathematiques superieures, Montreal, Canada, August 3-21, 1987

An Introduction to Mathematical Population Dynamics

Автор: Mimmo Iannelli; Andrea Pugliese
Название: An Introduction to Mathematical Population Dynamics
ISBN: 3319030256 ISBN-13(EAN): 9783319030258
Издательство: Springer
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Цена: 10480.00 р.
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Описание: This book is an introduction to mathematical biology for students with no experience in biology, but who have some mathematical background.

Mathematical Models and Immune Cell Biology

Автор: Carmen Molina-Par?s; Grant Lythe
Название: Mathematical Models and Immune Cell Biology
ISBN: 1493901230 ISBN-13(EAN): 9781493901234
Издательство: Springer
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Цена: 28732.00 р.
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Описание: This volume contains chapters on mathematical modeling, on immunology, and on mathematical modeling in immunology. The reader will also find chapters on dendritic cells, B cells and germinal centers.

Mathematical Biology I. An Introduction

Автор: Murray, James D.
Название: Mathematical Biology I. An Introduction
ISBN: 1475777094 ISBN-13(EAN): 9781475777093
Издательство: Springer
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Цена: 9781.00 р.
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Описание: Providing an in-depth look at the practical use of math modeling, it features exercises throughout that are drawn from a variety of bioscientific disciplines - population biology, developmental biology, physiology, epidemiology, and evolution, among others.


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