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Chromosome and Genomic Engineering in Plants: Methods and Protocols, Murata Minoru


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Автор: Murata Minoru
Название:  Chromosome and Genomic Engineering in Plants: Methods and Protocols
ISBN: 9781493981632
Издательство: Springer
Классификация:
ISBN-10: 1493981633
Обложка/Формат: Paperback
Страницы: 218
Вес: 0.41 кг.
Дата издания: 21.04.2018
Серия: Methods in molecular biology
Язык: English
Издание: Softcover reprint of
Иллюстрации: 38 illustrations, color; 24 illustrations, black and white; xi, 218 p. 62 illus., 38 illus. in color.
Размер: 25.40 x 17.78 x 1.24 cm
Читательская аудитория: General (us: trade)
Подзаголовок: Methods and protocols
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: This volume assembles protocols for chromosome engineering and genome editing in two recently developed approaches for manipulating chromosomal and genomic DNA in plants.


Chromosome and Genomic Engineering in Plants

Автор: Murata
Название: Chromosome and Genomic Engineering in Plants
ISBN: 1493949292 ISBN-13(EAN): 9781493949298
Издательство: Springer
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Цена: 18167.00 р.
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Описание: This volume assembles protocols for chromosome engineering and genome editing in two recently developed approaches for manipulating chromosomal and genomic DNA in plants. The first approach is a “plant chromosome vector” system, which allows the introduction of desired genes or DNA into target sites on the chromosome vector, particularly by sequence-specific recombination. The second approach is “genome-editing,” which makes it possible to introduce mutations into any of the genes of DNA that we wish to change. In addition, this book also covers other related techniques used to accelerate progress in plant chromosome and genome engineering. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.Cutting-edge and thorough, Chromosome and Genomic Engineering in Plants: Methods and Protocols provides a comprehensive source of protocols and other necessary information to anyone interested in this field of study.

Chromosome Structure and Function

Автор: Rudi Appels; J. Perry Gustafson
Название: Chromosome Structure and Function
ISBN: 1461283043 ISBN-13(EAN): 9781461283041
Издательство: Springer
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Описание: A Historical Perspective on the Study of Chromosome Structure and Function R. Stadler (1954) The very strong influence of reductionism in the history of understanding chromosome structure and function is evident in the above quotation from Stadler`s 1954 paper, "The gene".

Plant Chromosome Engineering

Автор: James A. Birchler
Название: Plant Chromosome Engineering
ISBN: 149395797X ISBN-13(EAN): 9781493957972
Издательство: Springer
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Цена: 20263.00 р.
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Описание: In this book expert researchers present techniques for the modification of crops and other plant species in order to achieve the goal of developing novel approaches to the production of food, feed, fuel, fiber and pharmaceuticals.

Trends in Chromosome Research

Автор: Tikaram Sharma
Название: Trends in Chromosome Research
ISBN: 366210623X ISBN-13(EAN): 9783662106235
Издательство: Springer
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Описание: Application of various molecular meiosis and the next to molecular events in techniques in chromosome research has subse- meiotic prophase in the baker`s yeast.

Protein Phosphatases and Stress Management in Plants: Functional Genomic Perspective

Автор: Pandey Girdhar K.
Название: Protein Phosphatases and Stress Management in Plants: Functional Genomic Perspective
ISBN: 3030487326 ISBN-13(EAN): 9783030487324
Издательство: Springer
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Цена: 20962.00 р.
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Описание: With the holistic understanding of the signaling pathways involving phosphatases, one gene family or multiple genes or gene families, plant biologist can lay a foundation for designing and generating future crops, which can withstand the higher degree of environmental stresses.

Plant Genomics Databases: Methods and Protocols

Автор: Van Dijk Aalt D. J.
Название: Plant Genomics Databases: Methods and Protocols
ISBN: 149398263X ISBN-13(EAN): 9781493982639
Издательство: Springer
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Описание:

Preface...
Table of Contents...
Contributing Authors...


1. Ensembl Plants: Integrating Tools for Visualizing, Mining and Analyzing Plant Genomics Data
Dan M. Bolser, Daniel M. Staines, Emily Perry, and Paul J. Kersey

2. PGSB/MIPS PlantsDB Database Framework for the Integration and Analysis of Plant Genome Data
Manuel Spannagl, Thomas Nussbaumer, Kai Bader, Heidrun Gundlach, and Klaus FX Mayer

3. Plant Genome DataBase Japan (PGDBj)
Akihiro Nakaya, Hisako Ichihara, Erika Asamizu, Sachiko Shirasawa, Yasukazu Makamura, Satoshi Tabata, and Hideki Hirakawa

4. FLAGdb++: A Bioinformatic Environment to Study and Compare Plant Genomes
Jean Philippe Tamby and Vйronique Brunaud

5. Mining Plant Genomic and Genetic Data Using the GnpIS Information System
A-F Adam-Blondon, M. Alaux, S. Durand, T. Letellier, G. Merceron, N. Mohellibi, C. Pommier, D. Steinbach, F. Alfama, J. Amselem, D. Charruaud, N. Choisne, R. Flores, C. Guerche, V. Jamilloux, E. Kimmel, N. Lapalu, M. Loaec, C. Michotey, H. Quesneville

6. The Bio-Analytic Resource for Plant Biology
Jamie Waese and Nicholas J. Provart

7. The Evolution of Soybean Knowledge Base (SoyKB)
Trupti Joshi, Jiaojiao Wang, Hongxin Zhang, Shiyuan Chen, Shuai Zeng, Bowei Xu, and Dong Xu

8. Using TropGeneDB: a Database Containing Data on Molecular Markers, QTLs, Maps, Genotypes, and Phenotypes for Tropical Crops
Manuel Ruiz, Guilhem Sempere, and Chantal Hamelin

9. Species-Specific Genome Sequence Databases: A Practical Review
A.D.J. van Dijk

10. A Guide to the PLAZA 3.0 Plant Comparative Genomics Database
Klaas Vandepoele

11. Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0
Michiel Van Bel and Frederik Coppens
12. PlaNet: Comparative Co-Expression Network Analyses for Plants
Sebastian Proost and Marek Mutwil

13. Practical Utilization of OryzaExpress and Plant Omics Data Center Databases to Explore Gene Expression Networks in Oryza sativa and Other Plant Species
Toru Kudo, Shin Terashima, Yuno Takaki, Yukino Nakamura, Masaaki Kobayashi, and Kentaro Yano

14. Pathway Analysis and Omics Data Visualization using Pathway Genome Databases: FragariaCyc, A Case Study
Sushma Naithani and Pankaj Jaiswal

15. CSGRqtl: A Comparative Quantitative Trait Locus Database for Saccharinae Grasses
Dong Zhang and Andrew H. Paterson

16. Plant Genome Duplication Database
Tae-Ho Lee, Junah Kim, Jon S. Robertson, and Andrew H. Paterson

17. Variant Effect Prediction Analysis using Resources Available at Gramene Database
Sushma Naithani, Matt Geniza, and Pankaj Jaiswal

18. Plant Promoter Database
Kazutaka Kusunoki and Yoshiharu Y. Yamamoto

19. Construction of the Leaf Senescence Database and Functional Assessment of Senescence-Associated Genes
Zhonghai Li, Yi Zhao, Xiaochuan Liu, Zhiqiang Jiang, Jinying Peng, Jinpu Jin, Hongwei Guo, and Jingchu Luo

Chromosome Painting

Автор: Arun Kumar Sharma; Archana Sharma
Название: Chromosome Painting
ISBN: 9401038406 ISBN-13(EAN): 9789401038409
Издательство: Springer
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Описание: Chromosome Painting is the most modern and novel technique for directly identifying several gene sequences simultaneously in the chromosome, with the aid of specific probes in molecular hybridization.

Plant Genomics: Methods and Protocols

Автор: Busch Wolfgang
Название: Plant Genomics: Methods and Protocols
ISBN: 1493983644 ISBN-13(EAN): 9781493983643
Издательство: Springer
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Описание: Part I: Genotypes

1. CRISPR/Cas-mediated in planta Gene Targeting

Simon Schiml, Friedrich Fauser, and Holger Puchta

2. User Guide for the LORE1 Insertion Mutant Resource

Terry Mun, Anna Malolepszy, Niels Sandal, Jens Stougaard, and Stig U. Andersen

3. Enabling Reverse Genetics in Medicago truncatula Using High Throughput Sequencing for Tnt1 Flanking Sequence Recovery

Xiaofei Cheng, Nick Krom, Shulan Zhang, Kirankumar S. Mysore, Michael Udvardi, and Jiangqi Wen

4. Generation of Doubled Haploid Lines for QTL Mapping

Daniele L. Filiault, Danelle K. Seymour, Ravi Maruthachalam, and Julin N. Maloof

Part II: Phenotypes

5. Assessing Distribution and Variation of Genome-wide DNA Methylation using Short Read Sequencing

Jцrg Hagmann and Claude Becker

6. Circular Chromosome Conformation Capture in Plants

Stefan Grob

7. Genome Wide Profiling of Histone Modifications and Histone Variants in Arabidopsis thaliana and Marchantia polymorpha

Ramesh Yelagandula, Akihisa Osakabe, Elin Axelsson, Frederic Berger, and Tomokazu Kawashima

8. Tissue-Specific Transcriptome Profiling in Arabidopsis Roots

Erin E. Sparks and Philip N. Benfey

9. Sample Preparation Protocols for Protein Abundance, Acetylome and Phosphoproteome Profiling of Plant Tissues

Gaoyuan Song, Maxwell R McReynolds, and Justin W Walley

10. Automated High-throughput Root Phenotyping of Arabidopsis thaliana under Nutrient Deficiency Conditions

Santosh B. Satbhai, Christian Göschl, and Wolfgang Busch

11. Large-scale Phenotyping of Root Traits in the Model Legume Lotus japonicus

Marco Giovannetti, Anna Malolepszy, Christian Goeschl, and Wolfgang Busch

12. Long-term Confocal Imaging of Arabidopsis thaliana Roots for Simultaneous Quantification of Root Growth and Fluorescent Signals

Delyana Stoeva, Christian Gцschl, and Wolfgang Busch

Part III: Molecular Bases of Phenotypes

13. Identification of Protein-DNA Interactions Using Enhanced Yeast One-Hybrid Assays and a Semi-Automated Approach

Allison Gaudinier, Michelle Tang, Anne-Maarit Bеgman, and Siobhan M. Brady

14. Mapping Protein- protein Interaction using High-throughput Yeast-2-Hybrid

Jessica Lopez and M. Shahid Mukhtar

15. Mapping Protein-protein Interactions using Affinity Purification and Mass Spectrometry

Chin-Mei Lee, Christopher Adamchek, Ann Feke, Dmitri A. Nusinow, and Joshua M. Gendron

16. Measuring Protein Movement, Oligomerization State, and Protein-Protein Interaction in Arabidopsis Roots Using Scanning Fluorescence Correlation Spectroscopy (scanning FCS)
Natalie M. Clark and Rosangela Sozzani

17. Studying Protein-Protein Interactions in planta using Advanced Fluorescence Microscopy

Marc Somssich and Rьdiger Simon

18. Chemiluminescence Based Detection of Peptide Activity and Peptide-Receptor Binding in Plants

Mari Wildhagen, Markus Albert, and Melinka A. Butenko

19. Application of Chemical Genomics to Plant-Bacteria Communication: A High-Throughput System to Identify Novel Molecules Modulating the Induction of Bacterial Virulence Genes by Plant Signals

Elodie Vandelle, Maria Rita Puttilli, Andrea Chini, Giulia Devescovi, Vittorio Venturi, and Annalisa Polverari


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