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Microbiome Community Ecology, Muhammad Saleem


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Автор: Muhammad Saleem
Название:  Microbiome Community Ecology
ISBN: 9783319116648
Издательство: Springer
Классификация:

ISBN-10: 3319116649
Обложка/Формат: Soft cover
Страницы: 152
Вес: 0.24 кг.
Дата издания: 29.01.2015
Серия: SpringerBriefs in Ecology
Язык: English
Размер: 234 x 156 x 9
Читательская аудитория: Science
Основная тема: Microbial Ecology
Подзаголовок: Fundamentals and Applications
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: Chapter 1.

Microbiome ecosystem ecology: unseen majority in an anthropogenic ecosystem

Authors: M. Saleem

Abstract

1. Microbiome ecosystem ecology

References

Chapter 2.

Theories, mechanisms and patterns of microbiome species coexistence in an era of climate change

Authors: M. Saleem, ZH Pervaiz, MB Traw

Abstract

2.1. Niche theory and microbial diversity

2.1.1. Temperature-metabolic theory of ecology

(i). Thermal niche specialization

(ii). Temperature as a driver of ecological divergence, evolution, speciation and thermal niche evolution trade-offs

2.1.2. Implication of habitat heterogeneity in determining ecological niche

(i). Resource heterogeneity

Factors determining resource heterogeneity

Optimal foraging theory of ecology

r/K selection theory of ecology

(ii). Role of habitat physical structure and variations in determining ecological niche

(iii). Role of habitat pH in determining ecological niche

(iv). Role of biotic factors in determining ecological niche

2.2. Island biogeography theory and microbial diversity

2.2.1. Ecology theory of species area relationship

2.2.2 Ecological theory of distance decay relationships (DDR)

(i). Elevational patterns of microbial diversity

(ii). Latitudinal pattern of microbial diversity

2.3. Species-time relationships (STRs)

2.4. Neutral theory and microbial diversity

References

Chapter 3.

Eco-evolutionary processes regulating microbiome community assembly in a changing global ecosystem

Authors: M. Saleem

Abstract

3. Processes underlying microbiome community assembly

3.1. Selection

3.1.1. Constant selection pressure

3.1.2. Frequency- or density-dependent selection

(i). Negative frequency- or density-dependent selection

(ii). Positive frequency- or density-dependent selection

(iii). Spatially- or temporally-variable selection

3.2. Drift

3.2.1. Ecological drift

3.2.2. Evolutionary or genetic drift

3.2.3. Neutral drift

3.3. Dispersal

3.3.1. Environmental factors determining dispersal

(i). Dispersal in air/atmospheric ecosystem and air mediated microbial dispersal

(ii). Water currents and movement

(iii). Nutrients-mediated microbial dispersal

(iv). Miscellaneous factors determining microbial dispersal

3.3.2. Factors liming the dispersal of microbes

3.4. Diversification, speciation and mutation

5. Dormancy

References

Chapter 4.

Loss of microbiome ecological niches and diversity by global change and trophic downgrading

Authors: M. Saleem

Abstract

4. Habitat alteration, trophic downgrading and microbiome biodiversity loss

4.1. Atmosphere ecosystem

4.2. Phyllosphere ecosystem

4.3 Rhizosphere ecosystem

4.4. Human and animal ecosystem

4.5 Aquatic ecosystems

4.6 Extreme ecosystems

4.6. Miscellaneous

References

Chapter 5.

Microbiome mediated multitrophic interactions in an age of microbial extinction

Authors: M. Saleem

Abstract

5.1. Trophic interactions

5.1.1 Trophic interactions with protists predators

5.1.2. Trophic interactions with predatory bacteria

5.1.3. Trophic interactions with viruses

5.1.4. Multi-trophic interactions

5.2 Non-trophic interactions

References

Chapter 6.

Global microbiome for agroecology, industry and human well-being: opportunities and challenges in climate change

Authors: M. Saleem


Дополнительное описание: Chapter 1: Microbiome ecosystem ecology: unseen majority in an anthropogenic ecosystem.- Chapter 2: Theories, mechanisms and patterns of microbiome species coexistence in an era of climate change.- Chapter 3: Eco-evolutionary processes regulating microbio



Unravelling the Soil Microbiome

Автор: Rama Kant Dubey; Vishal Tripathi; Ratna Prabha; Ra
Название: Unravelling the Soil Microbiome
ISBN: 3030155153 ISBN-13(EAN): 9783030155155
Издательство: Springer
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Цена: 6986.00 р.
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Описание: This book explores the significance of soil microbial diversity to understand its utility in soil functions, ecosystem services, environmental sustainability, and achieving the sustainable development goals. With a focus on agriculture and environment, the book highlights the importance of the microbial world by providing state-of-the-art technologies for examining the structural and functional attributes of soil microbial diversity for applications in healthcare, industrial biotechnology, and bioremediation studies. In seven chapters, the book will act as a primer for students, environmental biotechnologists, microbial ecologists, plant scientists, and agricultural microbiologists. Chapter 1 introduces readers to the soil microbiome, and chapter 2 discusses the below ground microbial world. Chapter 3 addresses various methods for exploring microbial diversity, chapter 4 discusses the genomics methods, chapter 5 provides the metaproteomics and metatranscriptomics approaches and chapter 6 details the bioinformatics tools for soil microbial community analysis, and chapter 7 concludes the text with future perspectives on further soil microbial uses and applications.

Oral Mucosal Immunity and Microbiome

Автор: Georgios N. Belibasakis; George Hajishengallis; Na
Название: Oral Mucosal Immunity and Microbiome
ISBN: 3030285235 ISBN-13(EAN): 9783030285234
Издательство: Springer
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Цена: 27950.00 р.
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Описание: The first International Conference on Oral Mucosal Immunity and Microbiome (OMIM) aimed to highlight cutting-edge basic and translational research from an oral immunological and microbiological perspective. Oral diseases with a microbial etiology are the most prevalent chronic diseases of humans. Whilst not life-threatening, they can significantly compromise quality of life, are associated with increased risk for certain systemic diseases, and pose heavy financial burdens to national health systems. Hence, periodontal and peri-implant diseases, dental caries, root canal infections and mucosal infections are significant global public health problems.

In this book global experts summarize and discuss the latest progress made in oral mucosal immunity and the oral microbiome. Target audience is basic and/or translational researchers with expertise in host immunity and microbiome research, and interest in oral health and disease. This volume provides a much needed quantum leap in the field, by joining forces to address gaps at the oral mucosal immunity-microbiome cross-talk.
The Microbiome In Prenatal And Neonatal Life

Автор: Neu, Josef
Название: The Microbiome In Prenatal And Neonatal Life
ISBN: 0128205903 ISBN-13(EAN): 9780128205907
Издательство: Elsevier Science
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Цена: 19370.00 р.
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Описание:

We are changing our concept that the newborn infant emerges from a sterile environment. In-utero colonization may have major impacts on the developing mammal in terms of development of immunity and metabolism that, with epigenetic modifications, will lead to diseases in later life. In addition, the microbial profile that develops during and after birth depends on mode of delivery, type of feeding (human milk versus formula) and various other environmental factors to which the newborn is exposed. The Microbiome in Prenatal and Neonatal Life clarifies that the microbiome in the maternal fetal unit as well as the immediate changes that occur as new microbes are acquired postnatally play major roles in subsequent health and disease. Rapidly developing technologies for multi-omic analyses and systems biology are shifting paradigms in both scientific knowledge and clinical care.

The Microbiome: Interactions With Organ Systems, Diet, And Genetics, An Issue Of Gastroenterology Clinics Of North America

Автор: Diaz Heijtz, Rochellys
Название: The Microbiome: Interactions With Organ Systems, Diet, And Genetics, An Issue Of Gastroenterology Clinics Of North America
ISBN: 0323679005 ISBN-13(EAN): 9780323679008
Издательство: Elsevier Science
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Цена: 12462.00 р.
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Описание: Collected here for the first time are Elaine J. Lawless`s key articles on the topics of reciprocal ethnography and women`s narrative which influenced not only folklore, but also the allied fields of anthropology, sociology, performance studies, and women`s and gender studies. Lawless`s methods and research continue to be critically relevant in today`s global struggle for gender equality.

Heal Your Oral Microbiome: Balance and Repair Your Mouth Microbes to Improve Gut Health, Reduce Inflammation and Fight Disease

Название: Heal Your Oral Microbiome: Balance and Repair Your Mouth Microbes to Improve Gut Health, Reduce Inflammation and Fight Disease
ISBN: 1612439004 ISBN-13(EAN): 9781612439006
Издательство: Gazelle Book Services
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Цена: 3215.00 р.
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Описание: Improve Your Health by Fixing Your Mouth-Gut Microbiome Connection

It's a popular theory that good health starts in your gut. But think about it: your mouth is the gateway to your gut. The good and bad bacteria in your mouth are directly linked to the bacteria in your digestive system. The oral microbiome can also affect illnesses and diseases like rheumatoid arthritis, diabetes, certain cancers, and more. That's why maintaining a balanced oral microbiome is one of the most important things you can do to set a solid foundation for your overall health.

Heal Your Oral Microbiome is the first book out there to focus exclusively on the oral microbiome. In these pages, you'll learn how your mouth paves the way for full-body health, as well as how to identify common habits and practices that could be negatively impacting your unique microbiome. You'll also discover important steps you can take to heal and balance your mouth's microbes to boost your immune system, fight a variety of illnesses and create a solid foundation for your overall well-being.

Dietary Fiber: Essential to the Human Microbiome and Health: Dietary Fiber

Автор: Radatti Peter V.
Название: Dietary Fiber: Essential to the Human Microbiome and Health: Dietary Fiber
ISBN: 1545015422 ISBN-13(EAN): 9781545015421
Издательство: Неизвестно
Цена: 2198.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: Este libro tambi n est disponible en espa ol. This book explains the importance of dietary fiber to the microbiome and your health. The microbiome is critical to your health yet we starve it by not eating the minimum daily requirement of mixed dietary fibers, poison it with preservatives, pesticides, glyphosate and antibiotics contained in our foods. The microbiome is critical to our immune systems, general health, hormonal system and the way we think. It directly affects our brains and it's imbalance is a suspect in some mental diseases as well as several degenerative diseases. The microbiome is not well understood and will be the low hanging fruit in medical research for the next 50 to 100 years. There is even a new field of study concerning the interaction of the brain and gt/microbiome, Neurogastroenterology. The paperback version of this book is $9, Kindle $2.99. Kindle version is free with purchase of paperback under Amazon match book program. Kindle version can be read for free under Kindle Unlimited program or Kindle Borrow programs. None of the author's books contain DRM.

Statistical Analysis of Microbiome Data with R

Автор: Xia Yinglin, Sun Jun, Chen Ding-Geng
Название: Statistical Analysis of Microbiome Data with R
ISBN: 9811315337 ISBN-13(EAN): 9789811315336
Издательство: Springer
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Цена: 20962.00 р.
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Описание: Chapter 1: Introduction to R, RStudio and ggplot2 1.1 Introduction to R 1.2 Introduction to RStudio 1.3 Introduction to ggplot2 1.4 Introduction to R Packages for Microbiome Data
Chapter 2: What are Microbiome Data?2.1 Phylogenetics--The Basics 2.2 What Microbiome Data Look Like? 2.2.1 Basic Data Structure and Format of Microbiome Data 2.2.2 OUT Table2.2 3 Response Variables and Covariates2.3 Some Specific Features of Microbiome Data
Chapter 3: Bioinformatic and Statistical Analyses of Microbiome Data 3.1 Overview of Bioinformatic Analysis 3.1.1 Taxonomic Diversity: from the 16S-based Approach 3.1.2 Taxonomic Profiling of Shotgun Metagenomes3.1.3 Introduction to Bioinformatic toolso QIIME o Mothuro 16S rRNA Gene Sequence Data Analysis using QIIME and Mothuro Other Biostatistics Tools3.2 Statistical Analysis of Microbiome Community Composition 3.2.1 Alpha Diversity Analysis and Statistical Measurements 3.2.2 Beta Diversity Analysis and Statistical Measurements3.3 Multivariate Statistical Techniques 3.3.1Data Visualization: Principal Component and Principal Coordinates Analyses 3.3.2 Classification and Clustering with Visualization 3.4 Hypothesis Testing and Statistical Modeling 3.4.1 Statistical Testing of Microbiome Community 3.4.2 Multivariate Statistical Methods and Modeling of Microbiome Community and Environmental Covariates3.4.3 Mediational and Longitudinal Microbiome Data Analysis3.4.4 Host Interactions and Interventions3.4.5 Mediation Analysis and Longitudinal Analysis 3.5 Multiple Comparisons and Testing Correlation 3.6 Correlation Analysis of Microbiome Community and Environmental Covariates
Chapter 4: Power and Sample Size Calculation in Hypothesis Testing Microbiome Data4.1 Statistical Hypothesis Testing and Power Analysis 4.1.1 Hypothesis Testing 4.1.2 Power Analysis and Sample Size Calculation4.2 Comparing Diversity or a Taxon of Interest between Two Groups 4.2.1 Hypotheses and Basic Power and Sample Size Formulas4.2.2 Diversity Data for Vitamin D and Vitamin D Receptor Study4.2.3 Theory of Power for a Test for Comparing Proportions4.2.4 Power of Fisher's Exact Test for Comparing Proportions4.2.5 R Function power.t.test4.3 Comparing Diversity across More than Two Groups 4.3.1 Hypotheses and Theory of Power for One-Way ANOVA4.3.2 Examples4.3.2 R Function pwr.avova.test4.4 Comparing the Frequency of all Taxa across Groups4.4.1 Hypotheses Testing and Power and Sample Size Calculations for Comparing all Taxa4.4.2 Dirichlet-multinomial model in Power and Sample Size Analyses4.4.3 Power and Size Calculations using HMP Package4.5 Power and Sample Size Estimation using Pairwise Distances and PERMANOVA 4.5.1 PERMANOVA and Estimation of PERMANOVA Power 4.5.2 Examples using micropower Package4.6 Power Calculations using ANOSIM Package
Chapter 5: Microbiome Data Management5.1 Data Importing and Merging datasets or components 5.1.1 Importing the Output from QIIME 5.1.2 Importing the Output from mothur&

The Microbiome In Health And Disease,171

Автор: Sun, Jun
Название: The Microbiome In Health And Disease,171
ISBN: 0128200006 ISBN-13(EAN): 9780128200001
Издательство: Elsevier Science
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Цена: 21054.00 р.
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Описание:

The Microbiome in Health and Disease, Volume 171 in the Progress in Molecular Biology and Translational Science series, provides the most topical, informative and exciting monographs available on a wide variety of research topics. The series includes in-depth knowledge on the molecular biological aspects of organismal physiology, with this release including chapters on Microbiome in health and disease, CNS development and microbiome in infants, A gut feeling in ALS, Microbiome (Virome) and virus infection, Bugs and Drugs: microbiome in medicine metabolism, Immunity, T cells, and microbiome, Salmonella (Bacterial) infection and cancer: of mice and men, and many other highly researched topics.

The Developing Microbiome

Автор: Claud, Erika Chiong
Название: The Developing Microbiome
ISBN: 0128206020 ISBN-13(EAN): 9780128206027
Издательство: Elsevier Science
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Цена: 21728.00 р.
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Описание:

The Developing Microbiome: Lessons from Early Life focuses on the establishment of the microbiome in early life, exposing it as a key mediator of diseases and health throughout the lifecycle. The content presents a comprehensive view of the status of the field and draws real-world correlations to health and disease states. It collates the significant research being done in the pediatric microbiome research space and bridges the knowledge gap showing the factors that impact health and disease states throughout the lifecycle. Finally, it offers knowledge on how the microbiome is and can be manipulated to promote change.

This is a perfect reference for both researchers and clinical scientists who are interested in the role of the infant microbiome in health and disease, as well as gastroenterologists and pediatricians looking to affect change in their patients.

Colorectal Neoplasia And The Colorectal Microbiome

Автор: Floch, Martin H.
Название: Colorectal Neoplasia And The Colorectal Microbiome
ISBN: 0128196726 ISBN-13(EAN): 9780128196724
Издательство: Elsevier Science
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Цена: 22738.00 р.
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Описание:

Colorectal Neoplasia and the Microbiome: Dysplasia, Probiotics, and Fusobacteria provides foundational knowledge on the gut microbiome and evidence for an association with colorectal neoplasia. It covers the role of microbiota in causing adenomatous polyps and colorectal cancer as well as the modulatory effect of diet and probiotics. Chapters explain a foundational history of microbiology in the colon, the epidemiology of colon polyps and cancer, dysbiosis, the role of immunology and bacteria, and the diet. The book combines medical and scientific aspects to show mechanistic aspects between microbiota and hosts, clearly presenting the association between microbiota, colonic lesions and possible causal links.

The book is essential reading for everyone working with human microbiota including basic scientists, physiologists of the intestine, experts in intestinal microbiota, gastroenterologists, oncologists and surgeon.

The Microbiome Diet Reset: A Practical Guide to Restore and Protect a Healthy Microbiome

Автор: Purdy Mary MS Rdn
Название: The Microbiome Diet Reset: A Practical Guide to Restore and Protect a Healthy Microbiome
ISBN: 1641525320 ISBN-13(EAN): 9781641525329
Издательство: Неизвестно
Цена: 1792.00 р.
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Описание:

A healthier microbiome begins by changing your diet and your lifestyle

Cultivating a healthy gut is the key to better overall health and well-being. The Microbiome Diet Reset will get you on the right path with easy, affordable recipes you can make in minutes as well as practical recommendations to rehabilitate and maintain a well-balanced microbiome.

From sour 'n' spicy Kimchi to hearty Four Bean Chili, this combined cookbook and meal plan delivers everything you need to kick-start a bacteria-friendly microbiome diet. You'll boost your metabolism and your immune system while enjoying more fresh vegetables, fermented foods, beans, and whole grains. Reset with this microbiome diet--your gut will love you for it

The Microbiome Diet Reset features:

  • Restorative recipes--Discover dozens of delicious prebiotic-packed and probiotic-friendly microbiome diet options.
  • Meal planning--Explore two weekly menus, including one for regular eaters and one that's FODMAP-friendly for those with sensitive stomachs.
  • Essential extras--Get a brief overview of your microbiome, time-saving tips and tricks, sample shopping lists, and more.

Boost immunity and improve digestion with The Microbiome Diet Reset.

The Microbiome,176

Автор: Kasselman, Lora
Название: The Microbiome,176
ISBN: 0128207973 ISBN-13(EAN): 9780128207970
Издательство: Elsevier Science
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Цена: 21054.00 р.
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Описание:

The influence of our diet on the bacteria we harbor in our intestinal tract is now recognized as a crucial factor in our overall health and mental well-being. A wealth of exciting new research suggests that gut flora can have a profound impact on brain development, personality, cognition, and mental health. Clinicians, health experts and the lay public remain uncertain as to how to apply the accumulating information in a practical manner to improve quality of life. This volume will address the need to assemble the known facts and provide guidance in their implementation. We review experimental and population level data which explore associations between the gut microbiome and the following: personality traits, depression, anxiety, autism, schizophrenia, cognition, dementia, and neurodegeneration. Additionally, this volume will consider the influence of the maternal microbiome on brain development. A highlight of this publication is that it addresses the potential benefits of microbiota-focused prevention and treatment therapies.


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