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Scalable Big Data Analytics for Protein Bioinformatics, Dariusz Mrozek


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Автор: Dariusz Mrozek
Название:  Scalable Big Data Analytics for Protein Bioinformatics
ISBN: 9783030075385
Издательство: Springer
Классификация:






ISBN-10: 3030075389
Обложка/Формат: Soft cover
Страницы: 315
Вес: 0.71 кг.
Дата издания: 2018
Серия: Computational Biology
Язык: English
Иллюстрации: XXVI, 315 p. 151 illus., 110 illus. in color.
Размер: Book (Paperback Initiative)
Основная тема: Computer Science
Подзаголовок: Efficient Computational Solutions for Protein Structures
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание:
This book presents a focus on proteins and their structures. The text describes various scalable solutions for protein structure similarity searching, carried out at main representation levels and for prediction of 3D structures of proteins. Emphasis is placed on techniques that can be used to accelerate similarity searches and protein structure modeling processes.
The content of the book is divided into four parts. The first part provides background information on proteins and their representation levels, including a formal model of a 3D protein structure used in computational processes, and a brief overview of the technologies used in the solutions presented in the book. The second part of the book discusses Cloud services that are utilized in the development of scalable and reliable cloud applications for 3D protein structure similarity searching and protein structure prediction. The third part of the book shows the utilization of scalable Big Data computational frameworks, like Hadoop and Spark, in massive 3D protein structure alignments and identification of intrinsically disordered regions in protein structures. The fourth part of the book focuses on finding 3D protein structure similarities, accelerated with the use of GPUs and the use of multithreading and relational databases for efficient approximate searching on protein secondary structures.
The book introduces advanced techniques and computational architectures that benefit from recent achievements in the field of computing and parallelism. Recent developments in computer science have allowed algorithms previously considered too time-consuming to now be efficiently used for applications in bioinformatics and the life sciences. Given its depth of coverage, the book will be of interest to researchers and software developers working in the fields of structural bioinformatics and biomedical databases.

Дополнительное описание: Formal Model of 3D Protein Structures for Functional Genomics, Comparative Bioinformatics, and Molecular Modeling.- Multithreaded PSS-SQL for Searching Databases of Secondary Structures.- GPU and CUDA for 3D Protein Structure Similarity Searching.- Cloud



Engineering scalable, elastic, and cost-efficient cloud computing applications

Название: Engineering scalable, elastic, and cost-efficient cloud computing applications
ISBN: 3319542850 ISBN-13(EAN): 9783319542850
Издательство: Springer
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Цена: 7685.00 р.
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Описание: Overviewing problems involved in engineering scalable, elastic, and cost-efficient cloud computing services, this book describes the CloudScale method a description of rescuing tools and the required steps to exploit these tools. With the CloudScale method, software architects can analyze both existing and planned IT services.

Protein Bioinformatics: An Algorithmic Approach to Sequence and Structure Analysis

Автор: Ingvar Eidhammer
Название: Protein Bioinformatics: An Algorithmic Approach to Sequence and Structure Analysis
ISBN: 0470848391 ISBN-13(EAN): 9780470848395
Издательство: Wiley
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Цена: 12189.00 р.
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Описание: This book takes the novel approach to cover both the sequence and structure analysis of proteins in one volume and from an algorithmic perspective. Key features of the book include:* Provides a comprehensive introduction to the analysis of protein sequence and structure analysis.

Scalable Big Data Analytics for Protein Bioinformatics

Автор: Dariusz Mrozek
Название: Scalable Big Data Analytics for Protein Bioinformatics
ISBN: 3319988387 ISBN-13(EAN): 9783319988382
Издательство: Springer
Рейтинг:
Цена: 13974.00 р.
Наличие на складе: Поставка под заказ.

Описание:

This book presents a focus on proteins and their structures. The text describes various scalable solutions for protein structure similarity searching, carried out at main representation levels and for prediction of 3D structures of proteins. Emphasis is placed on techniques that can be used to accelerate similarity searches and protein structure modeling processes.
The content of the book is divided into four parts. The first part provides background information on proteins and their representation levels, including a formal model of a 3D protein structure used in computational processes, and a brief overview of the technologies used in the solutions presented in the book. The second part of the book discusses Cloud services that are utilized in the development of scalable and reliable cloud applications for 3D protein structure similarity searching and protein structure prediction. The third part of the book shows the utilization of scalable Big Data computational frameworks, like Hadoop and Spark, in massive 3D protein structure alignments and identification of intrinsically disordered regions in protein structures. The fourth part of the book focuses on finding 3D protein structure similarities, accelerated with the use of GPUs and the use of multithreading and relational databases for efficient approximate searching on protein secondary structures.
The book introduces advanced techniques and computational architectures that benefit from recent achievements in the field of computing and parallelism. Recent developments in computer science have allowed algorithms previously considered too time-consuming to now be efficiently used for applications in bioinformatics and the life sciences. Given its depth of coverage, the book will be of interest to researchers and software developers working in the fields of structural bioinformatics and biomedical databases.
Fast and Scalable Cloud Data Management

Автор: Gessert Felix, Wingerath Wolfram, Ritter Norbert
Название: Fast and Scalable Cloud Data Management
ISBN: 3030435059 ISBN-13(EAN): 9783030435059
Издательство: Springer
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Цена: 19564.00 р.
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Описание: Preface.- 1 Introduction.- 2 Latency in Cloud-Based Applications.- 3 HTTP for Globally Distributed Applications.- 4 Systems for Scalable Data Management.- 5 Caching in Research & Industry.- 6 Transactional Semantics.-7 Polyglot Persistence in Data Management.- 8 The NoSQL Toolbox: The NoSQL Landscape in a Nutshell.- 9 Summary & Future Trends.

Software Project Management for Distributed Computing: Life-Cycle Methods for Developing Scalable and Reliable Tools

Автор: Mahmood Zaigham
Название: Software Project Management for Distributed Computing: Life-Cycle Methods for Developing Scalable and Reliable Tools
ISBN: 3319853708 ISBN-13(EAN): 9783319853703
Издательство: Springer
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Цена: 13974.00 р.
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Описание:

Part I: Characteristics and Estimation of Software Projects for Distributed Computing

Modelling of Reusability Estimation in Software Design with External Constraints
R. Selvarani and P. Mangayarkarasi

Estimation of Costs and Time for the Development of Distributed Software
Manal El Bajta, Ali Idri, Joaquнn Nicolas Ros, Josй Luis Fernandez-Aleman, and Ambrosio Toval

Using COSMIC for the Functional Size Measurement of Distributed Applications in Cloud Environments
Filomena Ferrucci, Carmine Gravino, and Pasquale Salza

Characteristics of Large-Scale Defense Projects and the Dominance of Software and Software Project Management
Kadir Alpaslan Demir

Software Project Management as a Service (SPMaaS): Perspectives and Benefits
Muthu Ramachandran and Vikrant Chaugule

Part II: Approached and Frameworks for Software Development and Software Project Management

Component-Based Hybrid Reference Architecture for Managing Adaptable Embedded Software Development
Bo Xing

3PR Framework for Software Project Management: People, Processes, Products and Risks
Kadir Alpaslan Demir

CrowdSWD: A Novel Framework for Crowdsourcing Software Development Inspired by the Concept of Biological Metaphor
Tarek A. Ali, Eman S. Nasr, and Mervat H. Gheith

An Approach to Migrate and Manage Software: Cloud Based Requirements Management
Areeg Samir

A Novel Approach to Modelling Distributed Systems - Using Large-Scale Multi-Agent Systems
Bogdan Okresa Đuric

Part III: Advances in Software Project Management and Distributed Software Development

Optimizing Software Error Proneness Prediction using Bird Mating AlgorithmAmrit Pal, Harsh Jain, and Manish Kumar

i(mproved)Agile: A Customized Scrum Process for Project Management in Defense & Security
Luigi Benedicenti, Paolo Ciancarini, Franco Cotugno, Angelo Messina, Alberto Sillitti, and Giancarlo Succi

Ontology Annotation for Software Engineering Project Management in Multi-site Distributed Software Development Environments
Pornpit Wongthongtham, Udsanee Pakdeetrakulwong, and Syed Hassan Marzooq

Investigating the Scope for Agile Project Management to be Adopted by Higher Education Institutions
Simon P Philbin

Software Project Management for Combined Software and Data Engineering
Seyyed M. Shah, James Welch, Jim Davies, and Jeremy Gibbons

Scalable Pattern Recognition Algorithms

Автор: Pradipta Maji; Sushmita Paul
Название: Scalable Pattern Recognition Algorithms
ISBN: 3319379658 ISBN-13(EAN): 9783319379654
Издательство: Springer
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Цена: 15372.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: This book addresses the need for a unified framework describing how soft computing and machine learning techniques can be judiciously formulated and used in building efficient pattern recognition models.

Building Scalable Network Services

Автор: Cheng Jin; Sugih Jamin; Danny Raz; Yuval Shavitt
Название: Building Scalable Network Services
ISBN: 1461347114 ISBN-13(EAN): 9781461347118
Издательство: Springer
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Цена: 13974.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: Building Scalable Network Services: Theory and Practice is on building scalable network services on the Internet or in a network service provider`s network.

Scalable Uncertainty Management: 14th International Conference, Sum 2020, Bozen-Bolzano, Italy, September 23-25, 2020, Proceedings

Автор: Davis Jesse, Tabia Karim
Название: Scalable Uncertainty Management: 14th International Conference, Sum 2020, Bozen-Bolzano, Italy, September 23-25, 2020, Proceedings
ISBN: 3030584488 ISBN-13(EAN): 9783030584481
Издательство: Springer
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Цена: 6986.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: This book constitutes the refereed proceedings of the 14th International Conference on Scalable Uncertainty Management, SUM 2020, which was held in Bozen-Bolzano, Italy, in September 2020. The 12 full, 7 short papers presented in this volume were carefully reviewed and selected from 30 submissions.

Scalable Pattern Recognition Algorithms

Автор: Pradipta Maji; Sushmita Paul
Название: Scalable Pattern Recognition Algorithms
ISBN: 3319056298 ISBN-13(EAN): 9783319056296
Издательство: Springer
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Цена: 18167.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: This book addresses the need for a unified framework describing how soft computing and machine learning techniques can be judiciously formulated and used in building efficient pattern recognition models.

Engineering Scalable, Elastic, and Cost-Efficient Cloud Computing Applications: The Cloudscale Method

Автор: Becker Steffen, Brataas Gunnar, Lehrig Sebastian
Название: Engineering Scalable, Elastic, and Cost-Efficient Cloud Computing Applications: The Cloudscale Method
ISBN: 3319853635 ISBN-13(EAN): 9783319853635
Издательство: Springer
Рейтинг:
Цена: 7685.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: This book provides an overview of the problems involved in engineering scalable, elastic, and cost-efficient cloud computing services and describes the CloudScale method - a description of rescuing tools and the required steps to exploit these tools.

Scalable Network Monitoring in High Speed Networks

Автор: Baek-Young Choi; Zhi-Li Zhang; David Hung-Chang Du
Название: Scalable Network Monitoring in High Speed Networks
ISBN: 1489985638 ISBN-13(EAN): 9781489985637
Издательство: Springer
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Цена: 12577.00 р.
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Описание: Network monitoring serves as the basis for a wide scope of network, engineering and management operations. This book presents accurate measurement schemes from both traffic and performance perspectives, and introduces some adaptive sampling techniques.

From Protein Structure to Function with Bioinformatics

Автор: J. Rigden, Daniel (Ed.)
Название: From Protein Structure to Function with Bioinformatics
ISBN: 9402414827 ISBN-13(EAN): 9789402414820
Издательство: Springer
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Цена: 41925.00 р.
Наличие на складе: Поставка под заказ.

Описание: This book is about protein structural bioinformatics and how it can help understand and predict protein function. It covers structure-based methods that can assign and explain protein function based on overall folds, characteristics of protein surfaces, occurrence of small 3D motifs, protein-protein interactions and on dynamic properties. Such methods help extract maximum value from new experimental structures, but can often be applied to protein models. The book also, therefore, provides comprehensive coverage of methods for predicting or inferring protein structure, covering all structural classes from globular proteins and their membrane-resident counterparts to amyloid structures and intrinsically disordered proteins. The book is split into two broad sections, the first covering methods to generate or infer protein structure, the second dealing with structure-based function annotation. Each chapter is written by world experts in the field. The first section covers methods ranging from traditional homology modelling and fold recognition to fragment-based ab initio methods, and includes a chapter, new for the second edition, on structure prediction using evolutionary covariance. Membrane proteins and intrinsically disordered proteins are each assigned chapters, while two new chapters deal with amyloid structures and means to predict modes of protein-protein interaction. The second section includes chapters covering functional diversity within protein folds and means to assign function based on surface properties and recurring motifs. Further chapters cover the key roles of protein dynamics in protein function and use of automated servers for function inference. The book concludes with two chapters covering case studies of structure prediction, based respectively on crystal structures and protein models, providing numerous examples of real-world usage of the methods mentioned previously. This book is targeted at postgraduate students and academic researchers. It is most obviously of interest to protein bioinformaticians and structural biologists, but should also serve as a guide to biologists more broadly by highlighting the insights that structural bioinformatics can provide into proteins of their interest.


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