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The Marine Microbiome, Stal Lucas J., Cretoiu Mariana Silvia


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Автор: Stal Lucas J., Cretoiu Mariana Silvia
Название:  The Marine Microbiome
ISBN: 9783030903824
Издательство: Springer
Классификация:



ISBN-10: 3030903826
Обложка/Формат: Hardcover
Страницы: 784
Вес: 1.26 кг.
Дата издания: 01.04.2022
Серия: The microbiomes of humans, animals, plants, and the environment
Язык: English
Издание: 2nd ed. 2022
Иллюстрации: 92 illustrations, color; xvi, 766 p. 92 illus. in color.
Размер: 23.39 x 15.60 x 4.14 cm
Читательская аудитория: Professional & vocational
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: This updated and expanded second edition reviews numerous aspects of the marine microbiome and its possible industrial applications. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. In the first part of the book, diversity, origin and evolution of the marine microorganisms and viruses are discussed. The microbes presented originate from all three domains of life: Bacteria, Archaea, and Eukarya. The second part sheds some light on the different communities: it describes marine habitats and how their inhabitants control biogeochemical cycles. The third part finally examines the microbial ocean as a global system and evaluates methods of utilizing marine microbial resources. Adopting a translational approach, the book connects academic research with industrial applications, making it a fascinating read and valuable resource for microbiologists from both domains.
Дополнительное описание: Chapter 1: A Sea Of Microbes: What’s So Special About Marine Microbiology.- Part I: Diversity And Evolution Of Marine Microorganisms.- Chapter 2: Survival In A Sea Of Gradients: Bacterial And Archaeal Foraging In A Heterogeneous Ocean.- Chapter 3: Marine



Microbiome Community Ecology

Автор: Muhammad Saleem
Название: Microbiome Community Ecology
ISBN: 3319116649 ISBN-13(EAN): 9783319116648
Издательство: Springer
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Цена: 7685.00 р.
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Описание: Chapter 1.

Microbiome ecosystem ecology: unseen majority in an anthropogenic ecosystem

Authors: M. Saleem

Abstract

1. Microbiome ecosystem ecology

References

Chapter 2.

Theories, mechanisms and patterns of microbiome species coexistence in an era of climate change

Authors: M. Saleem, ZH Pervaiz, MB Traw

Abstract

2.1. Niche theory and microbial diversity

2.1.1. Temperature-metabolic theory of ecology

(i). Thermal niche specialization

(ii). Temperature as a driver of ecological divergence, evolution, speciation and thermal niche evolution trade-offs

2.1.2. Implication of habitat heterogeneity in determining ecological niche

(i). Resource heterogeneity

Factors determining resource heterogeneity

Optimal foraging theory of ecology

r/K selection theory of ecology

(ii). Role of habitat physical structure and variations in determining ecological niche

(iii). Role of habitat pH in determining ecological niche

(iv). Role of biotic factors in determining ecological niche

2.2. Island biogeography theory and microbial diversity

2.2.1. Ecology theory of species area relationship

2.2.2 Ecological theory of distance decay relationships (DDR)

(i). Elevational patterns of microbial diversity

(ii). Latitudinal pattern of microbial diversity

2.3. Species-time relationships (STRs)

2.4. Neutral theory and microbial diversity

References

Chapter 3.

Eco-evolutionary processes regulating microbiome community assembly in a changing global ecosystem

Authors: M. Saleem

Abstract

3. Processes underlying microbiome community assembly

3.1. Selection

3.1.1. Constant selection pressure

3.1.2. Frequency- or density-dependent selection

(i). Negative frequency- or density-dependent selection

(ii). Positive frequency- or density-dependent selection

(iii). Spatially- or temporally-variable selection

3.2. Drift

3.2.1. Ecological drift

3.2.2. Evolutionary or genetic drift

3.2.3. Neutral drift

3.3. Dispersal

3.3.1. Environmental factors determining dispersal

(i). Dispersal in air/atmospheric ecosystem and air mediated microbial dispersal

(ii). Water currents and movement

(iii). Nutrients-mediated microbial dispersal

(iv). Miscellaneous factors determining microbial dispersal

3.3.2. Factors liming the dispersal of microbes

3.4. Diversification, speciation and mutation

5. Dormancy

References

Chapter 4.

Loss of microbiome ecological niches and diversity by global change and trophic downgrading

Authors: M. Saleem

Abstract

4. Habitat alteration, trophic downgrading and microbiome biodiversity loss

4.1. Atmosphere ecosystem

4.2. Phyllosphere ecosystem

4.3 Rhizosphere ecosystem

4.4. Human and animal ecosystem

4.5 Aquatic ecosystems

4.6 Extreme ecosystems

4.6. Miscellaneous

References

Chapter 5.

Microbiome mediated multitrophic interactions in an age of microbial extinction

Authors: M. Saleem

Abstract

5.1. Trophic interactions

5.1.1 Trophic interactions with protists predators

5.1.2. Trophic interactions with predatory bacteria

5.1.3. Trophic interactions with viruses

5.1.4. Multi-trophic interactions

5.2 Non-trophic interactions

References

Chapter 6.

Global microbiome for agroecology, industry and human well-being: opportunities and challenges in climate change

Authors: M. Saleem

Microbiome in Plant Health and Disease: Challenges and Opportunities

Автор: Kumar Vivek, Prasad Ram, Kumar Manoj
Название: Microbiome in Plant Health and Disease: Challenges and Opportunities
ISBN: 9811384940 ISBN-13(EAN): 9789811384943
Издательство: Springer
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Цена: 20962.00 р.
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Описание:

The book discusses the complex interactions between plants and their associated microbial communities. It also elucidates the ways in which these microbiomes are connected with the plant system, and how they affect plant health.
The different chapters describe how microbiomes affect plants with regard to immunity, disease conditions, stress management and productivity. In addition, the book describes how an ‘additional plant genome’ functions as a whole organ system of the host, and how it presents both challenges and opportunities for the plant system. Moreover, the book includes a dedicated section on using omics tools to understand these interactions, and on exploiting them to their full potential.
The Brazilian Microbiome

Автор: Victor Pylro; Luiz Roesch
Название: The Brazilian Microbiome
ISBN: 331959995X ISBN-13(EAN): 9783319599953
Издательство: Springer
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Цена: 19564.00 р.
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Описание: Brazilian Microbiome: Current status and perspectives unites a set of distinguished investigators conducting microbiome research and builds a comprehensive reference book with up-to-date information regarding the Brazilian microbiome studies and trends.

The Marine Microbiome: An Untapped Source of Biodiversity and Biotechnological Potential

Автор: Stal Lucas J., Cretoiu Mariana Silvia
Название: The Marine Microbiome: An Untapped Source of Biodiversity and Biotechnological Potential
ISBN: 3319814184 ISBN-13(EAN): 9783319814186
Издательство: Springer
Рейтинг:
Цена: 19564.00 р.
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Описание: This book describes the state-of-the-art concerning the ‘marine microbiome’ and its uses in biotechnology. The first part discusses the diversity and ecology of marine microorganisms and viruses, including all three domains of life: Bacteria, Archaea, and Eukarya. It discusses whether marine microorganisms exist and, if so, why they might be unique. The second part presents selected marine habitats, their inhabitants and how they influence biogeochemical cycles, while the third discusses the utilization of marine microbial resources, including legal aspects, dissemination, and public awareness. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. The diversity of microbial life remains unquantified and largely unknown, and could represent a hidden treasure for human society. Accordingly, this book is also intended to connect academics and industry, providing essential information for microbiologists from both fields.

Climate Change and the Microbiome: Sustenance of the Ecosphere

Автор: Choudhary D. K., Mishra Arti, Varma Ajit
Название: Climate Change and the Microbiome: Sustenance of the Ecosphere
ISBN: 3030768627 ISBN-13(EAN): 9783030768621
Издательство: Springer
Цена: 32142.00 р.
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Описание: This book highlights the impact of climate change on the soil microbiome and its subsequent effects on plant health, soil-plant dynamics, and the ecosphere.

Advances in Plant Microbiome and Sustainable Agriculture

Автор: Ajar Nath Yadav; Ali Asghar Rastegari; Neelam Yada
Название: Advances in Plant Microbiome and Sustainable Agriculture
ISBN: 9811532079 ISBN-13(EAN): 9789811532078
Издательство: Springer
Рейтинг:
Цена: 27950.00 р.
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Описание: Plant microbiomes help to directly or indirectly promote plant growth using plant growth promoting attributes, and could potentially be used as biofertilizers/bioinoculants in place of chemical fertilizers.

The Brazilian Microbiome

Автор: Victor Pylro; Luiz Roesch
Название: The Brazilian Microbiome
ISBN: 3319867555 ISBN-13(EAN): 9783319867557
Издательство: Springer
Рейтинг:
Цена: 13974.00 р.
Наличие на складе: Поставка под заказ.

Описание: Brazilian Microbiome: Current status and perspectives unites a set of distinguished investigators conducting microbiome research and builds a comprehensive reference book with up-to-date information regarding the Brazilian microbiome studies and trends.

Statistical Analysis of Microbiome Data with R

Автор: Xia Yinglin, Sun Jun, Chen Ding-Geng
Название: Statistical Analysis of Microbiome Data with R
ISBN: 9811315337 ISBN-13(EAN): 9789811315336
Издательство: Springer
Рейтинг:
Цена: 20962.00 р.
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Описание: Chapter 1: Introduction to R, RStudio and ggplot2 1.1 Introduction to R 1.2 Introduction to RStudio 1.3 Introduction to ggplot2 1.4 Introduction to R Packages for Microbiome Data
Chapter 2: What are Microbiome Data?2.1 Phylogenetics--The Basics 2.2 What Microbiome Data Look Like? 2.2.1 Basic Data Structure and Format of Microbiome Data 2.2.2 OUT Table2.2 3 Response Variables and Covariates2.3 Some Specific Features of Microbiome Data
Chapter 3: Bioinformatic and Statistical Analyses of Microbiome Data 3.1 Overview of Bioinformatic Analysis 3.1.1 Taxonomic Diversity: from the 16S-based Approach 3.1.2 Taxonomic Profiling of Shotgun Metagenomes3.1.3 Introduction to Bioinformatic toolso QIIME o Mothuro 16S rRNA Gene Sequence Data Analysis using QIIME and Mothuro Other Biostatistics Tools3.2 Statistical Analysis of Microbiome Community Composition 3.2.1 Alpha Diversity Analysis and Statistical Measurements 3.2.2 Beta Diversity Analysis and Statistical Measurements3.3 Multivariate Statistical Techniques 3.3.1Data Visualization: Principal Component and Principal Coordinates Analyses 3.3.2 Classification and Clustering with Visualization 3.4 Hypothesis Testing and Statistical Modeling 3.4.1 Statistical Testing of Microbiome Community 3.4.2 Multivariate Statistical Methods and Modeling of Microbiome Community and Environmental Covariates3.4.3 Mediational and Longitudinal Microbiome Data Analysis3.4.4 Host Interactions and Interventions3.4.5 Mediation Analysis and Longitudinal Analysis 3.5 Multiple Comparisons and Testing Correlation 3.6 Correlation Analysis of Microbiome Community and Environmental Covariates
Chapter 4: Power and Sample Size Calculation in Hypothesis Testing Microbiome Data4.1 Statistical Hypothesis Testing and Power Analysis 4.1.1 Hypothesis Testing 4.1.2 Power Analysis and Sample Size Calculation4.2 Comparing Diversity or a Taxon of Interest between Two Groups 4.2.1 Hypotheses and Basic Power and Sample Size Formulas4.2.2 Diversity Data for Vitamin D and Vitamin D Receptor Study4.2.3 Theory of Power for a Test for Comparing Proportions4.2.4 Power of Fisher's Exact Test for Comparing Proportions4.2.5 R Function power.t.test4.3 Comparing Diversity across More than Two Groups 4.3.1 Hypotheses and Theory of Power for One-Way ANOVA4.3.2 Examples4.3.2 R Function pwr.avova.test4.4 Comparing the Frequency of all Taxa across Groups4.4.1 Hypotheses Testing and Power and Sample Size Calculations for Comparing all Taxa4.4.2 Dirichlet-multinomial model in Power and Sample Size Analyses4.4.3 Power and Size Calculations using HMP Package4.5 Power and Sample Size Estimation using Pairwise Distances and PERMANOVA 4.5.1 PERMANOVA and Estimation of PERMANOVA Power 4.5.2 Examples using micropower Package4.6 Power Calculations using ANOSIM Package
Chapter 5: Microbiome Data Management5.1 Data Importing and Merging datasets or components 5.1.1 Importing the Output from QIIME 5.1.2 Importing the Output from mothur&

Understanding the Microbiome Interactions in Agriculture and the Environment

Автор: Veera Bramhachari
Название: Understanding the Microbiome Interactions in Agriculture and the Environment
ISBN: 9811936951 ISBN-13(EAN): 9789811936951
Издательство: Springer
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Цена: 30745.00 р.
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Описание: This book illustrates the importance of microbiome interactions in sustainable agriculture and the environment. The chapters of the book provide information pertaining to the vast diversity of microbiomes in many ecosystems and their functional dynamics. The book also discusses bioremediation, space microbiomes, geo microbiomes, coral microbiomes, antibiotic resistomes, and rhizomicrobiome. It also sheds light on the complex syntrophic and other symbiotic interactions between bacteria, protists, plants, and certain animals in agricultural and environmental systems. The book, in turn, provides an understanding of the adaptation, resilience, and evolution of microbial ecosystems. Further, the chapters cover metagenomics analysis of microbiomes of a novel or extreme environments, microbial resilience or temporal fluctuations, symbiosis and co-evolution of the microbiome, and novel microbial interactions in agriculture and environment. Finally, the book elucidates a comprehensive yet representative description of complex structural and functional diversity within the plant and environmental microbiomes to reveal their immense potential. This book covers United Nations Sustainable Developmental Goal 2 towards Zero Hunger.

Microbiome Stimulants for Crops: Mechanisms and Applications

Автор: White James, Kumar Ajay, Droby Samir
Название: Microbiome Stimulants for Crops: Mechanisms and Applications
ISBN: 0128221224 ISBN-13(EAN): 9780128221228
Издательство: Elsevier Science
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Цена: 32844.00 р.
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Описание: Microbiome Stimulants for Crops: Mechanisms and Applications provides the latest developments in the real-world development and application of these crop management alternatives in a cost-effective, yield protective way. Sections address questions of research, development and application, with insights into recent legislative efforts in Europe and the United States. The book includes valuable information regarding mechanisms and the practical information needed to support the growing microbial inoculant and biostimulant industry, thus helping focus scientific research in new directions.

Plant Microbiome Paradigm

Автор: Varma Ajit, Tripathi Swati, Prasad Ram
Название: Plant Microbiome Paradigm
ISBN: 3030503941 ISBN-13(EAN): 9783030503949
Издательство: Springer
Рейтинг:
Цена: 20962.00 р.
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Описание:

1. Trichoderma: Advances in Biological Control for Sustainable Soil Ecosystem

Prachi Bhargava*

Institute of Biosciences and Technology

Sri RamSwaroop Memorial University, Deva Road, Lucknow

*Corresponding author email: prachi.bio@srmu.ac.in

2. Biocontrol Agents for Management of Fusarial Wilt of Banana(Musa) and Important Fruit Plants

Narendra Kumar and SM Paul Khurana*

Amity Institute of Biotechnology

Amity University, Haryana, Gurgaon, Manesar-122413

*Corresponding author email: smpaulkhurana@gmail.com

3. Host-pathogen Cross Talks: Basic Concept and Mechanisms

Saborni Maiti, Satish Kumar and Dhiraj Paul*

National Centre for Microbial Resource, National Centre for Cell Science

NCCS complex, University of Pune campus, Ganeshkhind, Pune, India

*Corresponding author email: pauldhiraj09@gmail.com

4. Rhizospheric Plant-microbe Interactions in Management of Infested Soils

Sarika Chaturvedi and SM Paul Khurana*

Amity Institute of Biotechnology

Amity University, Haryana, Gurgaon, Manesar-122413

*Corresponding author email: smpaulkhurana@gmail.com

5. Taking Soil-microbes-plant Interactions to the Practice: The Revolution of Ultrapure Inoculants

Cano C and Alberto Bago*

Laboratorio de Micorrizas In Vitro, Departamento de Microbiologia del suelo y Sistemas Simbioticos Estacion Experimental del Zaidin (CSIC), c) Profesor Albareda, 1

18008-Granada, Spain

*Corresponding author email: alberto.bago@eez.csic.es

6. Active Constituents of Medicinal Plants Through the Use of Microbes

Charu Gupta* and Dhan Prakash

AIHRS, f ull formJ-1 block, Room no. LG-13, Amity University UP, Sector 125, Noida- 201313, UP, India

*Corresponding author email: charumicro@gmail.com

7. Microbial Diversity In Soil: Biological Tools for Abiotic Stress Management in Plants

Neera Garg*, Aditi, Amandeep Cheema, Kiran Saroy

Department of Botany, Panjab University, Chandigarh-160014, India

*Corresponding author email: gargneera@gmail.com

8. Amelioration of Salt Stress Tolerance in Plants by Plant Growth Promoting Rhizobacteria: Insights from "Omics" Approaches

Zarin Taj, Mani Rajkumar and Dinakar Challabathula*

Department of Life Sciences, School of Basic and Applied Sciences

Central University of Tamil Nadu, Thiruvarur 610 101, India

*Corresponding author email: dinakarc@cutn.ac.in

9. Circadian Redox Rhythms Play an Important Role in Plant- pathogen Interaction

Snigdha Tiwari*, Siddarth N. Rahul, Jyoti Sharma, Alka Sahrawat

Shobhit Institute of Engineering and Technology, Meerut, Uttar Pradesh, India

*Corresponding author email: snigdha.tiwari07@gmail.com

10. Proteomics Approaches to Study the Three Way Interaction Between Antagonists, Host and Plant Pathogen in Response to Biological Control

Siddarth Nandan Rahul, Alka Sahrawat, Snigdha Tiwari, Jyoti Sharma,

Department of Biotech, Ag. & AI, Shobhit Institute of Engineering and Technology,

NH. 58, Roorkee Road, Dulheda Chauhan, Modipuram, Meerut, U.P. INDIA 250110

*Corresponding author email: sagar4499@gmail.com

11. Beneficial Soil Microbes and their Interaction to P

Phyto-Microbiome in Stress Regulation

Автор: Kumar Manoj, Kumar Vivek, Prasad Ram
Название: Phyto-Microbiome in Stress Regulation
ISBN: 9811525781 ISBN-13(EAN): 9789811525780
Издательство: Springer
Цена: 20962.00 р.
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Описание: Gathering contributions by authors with specialized expertise in plant growth and health under stress conditions, as well as opportunistic pathogenic bacteria, the book reviews the functional aspects of rhizospheric microorganisms and how they impact plant health and disease.


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