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Promoter Associated RNA: Methods and Protocols, Napoli Sara


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Автор: Napoli Sara
Название:  Promoter Associated RNA: Methods and Protocols
ISBN: 9781493982813
Издательство: Springer
Классификация:
ISBN-10: 1493982818
Обложка/Формат: Paperback
Страницы: 287
Вес: 0.52 кг.
Дата издания: 09.06.2018
Серия: Methods in molecular biology
Язык: English
Издание: Softcover reprint of
Иллюстрации: 45 tables, color; 182 illustrations, color; 101 illustrations, black and white; x, 287 p. 283 illus., 182 illus. in color.
Размер: 25.40 x 17.78 x 1.60 cm
Читательская аудитория: Professional & vocational
Подзаголовок: Methods and protocols
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание:
ChIP-seq for the Identification of Functional Elements in the Human Genome.- Identification of Candidate Functional Elements in the Genome from ChIP-seq Data.- GRO-seq, A Tool for Identification of Transcripts Regulating Gene Expression.-NanoCAGE: A Method for the Analysis of Coding and Non-coding 5-capped Transcriptomes.- Deep Cap Analysis of Gene Expression (CAGE): Genome-Wide Identification of Promoters, Quantification of their Activity Andtranscriptional Network Inference.- Deep-RACE: Comprehensive Search for Novel ncRNAs Associated to a Specific Locus.- In silico Prediction of RNA Secondary Structure.- Computational Prediction of RNA-Protein Interactions.- Isolation of Nuclear RNA-Associated Protein Complexes.- Identification of Long Non-Coding RNAs Associated to Human Disease Susceptibility.- Targeting Promoter-associated RNAs by siRNAs.- RNA-FISH to Study Regulatory RNA at the Site of Transcription.- Detection and Characterization of R Loop Structures.- Induction of Transcriptional Gene Silencing by Expression of shRNA Directed to c-Myc P2 Promoter in Hepatocellular Carcinoma by Tissue Specific Virosomal Delivery.- Targeting Promoter Associated Non-coding RNA In Vivo.- Manipulation of Promoter-Associated Noncoding RNAs in Mouse Early Embryos for Controlling Sequence-Specific Epigenetic Status.




Affinity Chromatography / Methods and Protocols

Автор: Zachariou Michael
Название: Affinity Chromatography / Methods and Protocols
ISBN: 1588296598 ISBN-13(EAN): 9781588296597
Издательство: Springer
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Цена: 2000.00 р.
Наличие на складе: Есть (2 шт.)
Описание: Thirty-eight years after its introduction, affinity chromatography remains a key tool in th armory of separation techniques available to separation and interaction scientists.  Expanded and updated from the first edition, this second edition volume aims to provide the beginner with the practical knowledge needed to develop affinity separations suitable for a variety of applications relevant to the post-genomic era.

In Situ Detection of DNA Damage / Methods and Protocols

Автор: Didenko Vladimir V.
Название: In Situ Detection of DNA Damage / Methods and Protocols
ISBN: 0896039528 ISBN-13(EAN): 9780896039520
Издательство: Springer
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Цена: 5809.00 р.
Наличие на складе: Есть (4 шт.)
Описание: In In Situ Detection of DNA Damage: Methods and Protocols, Vladimir Didenko and a panel of experts describe all the major in situ techniques for studying DNA damage and apoptosis, and how approaches originally designed to label apoptotic cells can be used for DNA damage analysis (and vice versa). The readily reproducible techniques presented here include all those designed to detect specific single- and double-stranded DNA breaks in tissue sections while using polymerases, ligases, nucleases, and kinases. There are also novel instrumental techniques that use ultrasound for in vivo and in situ detection of apoptotic DNA damage, and in situ applications of flow and laser-scanning cytometry for analysis of DNA strand breaks and apoptosis. State-of-the-art and highly practical, In Situ Detection of DNA Damage: Methods and Protocols presents for the first time a complete set of enzymatic methods for determining DNA breaks, and will greatly facilitate the work of all those studying the in situ detection of DNA damage and the labeling of apoptotic cells.

Single Nucleotide Polymorphisms / Methods and Protocols

Автор: Kwok Pui-Yan
Название: Single Nucleotide Polymorphisms / Methods and Protocols
ISBN: 0896039684 ISBN-13(EAN): 9780896039681
Издательство: Springer
Цена: 5809.00 р.
Наличие на складе: Есть (2 шт.)
Описание: Pui-Yan Kwok, MD, PhD, has assembled a comprehensive collection of readily reproducible techniques for the difficult process of single nucleotide polymorphisms (SNP) discovery and genotyping. These cutting-edge protocols for mutation/SNP detection utilize denaturing high-performance liquid chromatography (dHPLC), single-strand conformation polymorphism (SSCP), conformation-sensitive gel electrophoresis (CSGE), chemical cleavage, and direct sequencing. Equally powerful and up-to-date methods are given for genotyping SNPs, including molecular beacons, the Taqman assay, single-base extension approaches, pyrosequencing, ligation, the Invader assay, and primer extension with mass spectrometry detection.

Reverse Genetics of RNA Viruses: Methods and Protocols

Автор: Perez Daniel R.
Название: Reverse Genetics of RNA Viruses: Methods and Protocols
ISBN: 1493983539 ISBN-13(EAN): 9781493983537
Издательство: Springer
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Цена: 15372.00 р.
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Описание: This volume is a compilation of sixteen chapters that detail reverse genetics protocols. Reverse Genetics of RNA Viruses: Methods and Protocols guides readers through comprehensive protocols on RNA viruses, that were the most challenging to obtain and/or that were developed most recently. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Authoritative and practical, Reverse Genetics of RNA Viruses: Methods and Protocols aims to ensure successful results in the further study of this vital field.

Extracellular RNA: Methods and Protocols

Автор: Patel Tushar
Название: Extracellular RNA: Methods and Protocols
ISBN: 1493976516 ISBN-13(EAN): 9781493976515
Издательство: Springer
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Цена: 11179.00 р.
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Описание:

1. Extracellular RNAs - A New Awareness of Old Perspectives

Noah Sadik, Lilian Cruz, Alessandra Gurtner, Rodosthenis S. Rodosthenous , Sophie A. Dusoswa, Olivia Ziegler, Thomas Sebastiaan Van Solinge, Zhiyun Wei, Ane Miren Salvador Garicano, Bence Gyorgy, Marike Broekman, and Leonora Balaj

2. Overview of Protocols for Studying Extracellular RNA and Extracellular Vesicles

Julia Small, Roger Alexander, and Leonora Balaj

3. Extracellular RNA Isolation from Cell Culture Supernatant

Sawen Bakr., Bridget Simonson, Kirsty M. Danielson, and Saumya Das

4. Use of a Hollow Fiber Bioreactor to Collect Extracellular Vesicles from Cells in Culture

Irene K. Yan, Neha Shukla, David A. Borrelli, and Tushar Patel

5. Isolation of Extracellular RNA from Serum/Plasma

Justyna Filant, Parham Nejad, Anu Paul, Bridget Simonson, Srimeenakshi Srinivasan, Xuan Zhang, Leonora Balaj, Saumya Das, Roopali Gandhi, Louise C. Laurent, and Anil K. Sood

6. Isolation of Extracellular RNA from Bile

Irene K. Yan, Valentin X. Berdah, and Tushar Patel

7. Cushioned-Density Gradient Ultracentrifugation (C-DGUC): a Refined and High Performance Method for the Isolation, Characterization & Use of Exosomes

Kang Li, David K. Wong, King Yeung Hong, and Robert L. Raffai

8. Magnetic Particle-Based Immunoprecipitation of Nanoscale Extracellular Vesicles from Biofluids

Pete Heinzelman

9. Enrichment of Extracellular Vesicle Subpopulations via Affinity Chromatography

Michelle E. Hung, Stephen B. Lenzini, Devin M. Stranford, and Joshua N. Leonard

10. Detection and Analysis of Non-vesicular Extracellular RNA

Juan Pablo Tosar and Alfonso Cayota

11. Isolation of Plasma Lipoproteins as a Source of Extracellular RNA

Kang Li, David K. Wong, Fu Sang Luk, Roy Y. Kim, and Robert L. Raffai

12. Droplet Digital PCR for Quantitation of Extracellular RNA

Irene K Yan, Rishabh Lohray, and Tushar Patel

13. Preparation of Small RNA NGS Libraries from Biofluids

Alton Etheridge, Kai Wang, David Baxter, and David Galas

14. Multiplexed Detection and Quantitation of Extracellular Vesicle RNA Expression using NanoString

Neha Shukla, Irene K. Yan, and Tushar Patel

15. Milk-derived Extracellular Vesicles for Therapeutic Delivery of Small Interfering RNAs

Akiko Matsuda and Tushar Patel

16. Loading of Extracellular Vesicles with Hydrophobically Modified siRNAs

Marie-Cйcile Didiot, Reka A. Haraszti, Neil Aronin, and Anastasia Khvorova

RNA Nanostructures: Methods and Protocols

Автор: Bindewald Eckart, Shapiro Bruce A.
Название: RNA Nanostructures: Methods and Protocols
ISBN: 1493983954 ISBN-13(EAN): 9781493983957
Издательство: Springer
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Цена: 20962.00 р.
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Описание: This volume presents a collection of computational and experimental protocols pertaining to the creation, characterization, and utilization of RNA nanostructures.

Mitochondrial Gene Expression: Methods and Protocols

Автор: Minczuk Michal, Rorbach Joanna
Название: Mitochondrial Gene Expression: Methods and Protocols
ISBN: 1071608339 ISBN-13(EAN): 9781071608333
Издательство: Springer
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Цена: 18167.00 р.
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Описание: Authoritative and cutting-edge, Mitochondrial Gene Expression: Methods and Protocols aims to provide complementary approaches and practical guidelines. Chapter 7 is available Open Access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Cancer Susceptibility: Methods and Protocols

Автор: Webb Michelle
Название: Cancer Susceptibility: Methods and Protocols
ISBN: 1493957600 ISBN-13(EAN): 9781493957606
Издательство: Springer
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Цена: 19564.00 р.
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Описание: Over the past two decades, spectacular advances have been made in our understanding of the molecular genetics of cancer, leading to the pursuit of identifying genes that, when mutated, result in an increased susceptibility to the disease. In Cancer Susceptibility: Methods and Protocols, experts in the field bring together the most recent technological developments for identifying and screening cancer susceptibility genes. Divided into two clear sections, the book begins with gene identification, which updates and informs scientists working at identifying novel cancer susceptibility genes, while the second part deals with mutation screening technologies that aid scientists and clinicians working to translate this knowledge into the clinic. Written in the highly successful Methods in Molecular Biology™ series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Cancer Susceptibility: Methods and Protocols is a timely collection that seeks to provide researchers with the tools to predict and combat this terrible disease.

RNA and DNA Editing: Methods and Protocols

Автор: Aphasizhev Ruslan
Название: RNA and DNA Editing: Methods and Protocols
ISBN: 1493958216 ISBN-13(EAN): 9781493958214
Издательство: Springer
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Цена: 16769.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: The recent expansion in diversity of RNA and DNA editing types has stimulated the development of many unique genetic, molecular, biochemical, and computational approaches to biological issues. In RNA and DNA Editing: Methods and Protocols, leading experts in the field introduce methods developed over the last few years to study editing substrates, mechanisms of specificity, and functions of RNA and DNA editing enzymes and complexes. Sections of the book are dedicated to state-of-the art techniques which enable investigation of uracil insertion/deletion RNA editing in mitochondrion of Trypanosoma brucei, adenosine to inosine RNA editing, cytidine to uracil RNA and DNA editing, as well as tRNA editing and RNA modifications. Written in the highly successful Methods in Molecular Biology™ series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, RNA and DNA Editing: Methods and Protocols seeks to inspire the further development of these vital and powerful techniques.

RNA Abundance Analysis: Methods and Protocols

Автор: Jin Hailing, Gassmann Walter
Название: RNA Abundance Analysis: Methods and Protocols
ISBN: 1493959166 ISBN-13(EAN): 9781493959167
Издательство: Springer
Рейтинг:
Цена: 16769.00 р.
Наличие на складе: Есть у поставщика Поставка под заказ.

Описание: RNA abundance analysis is one of the most important approaches for gene expression studies in the field of molecular biology. In RNA Abundance Analysis: Methods and Protocols, expert researchers cover a wide range of techniques on RNA extraction, detection, quantification, visualization, and genome-wide profiling, from conventional methods to state-of-the-art high throughput approaches. This volume includes detailed techniques to examine mRNAs, small non-coding RNAs, protein-associated small RNAs, sulfur-containing RNAs, viral and satellite RNAs, RNA isoforms, and alternatively spliced RNA variants from various organisms, as well as key discussions of computational data processing for genome-wide datasets. Written for the highly successful Methods in Molecular Biology™ series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Essential and easy to use, RNA Abundance Analysis: Methods and Protocols provides a comprehensive set of techniques and methods on isolating and analyzing mRNAs, small RNAs, and modified RNAs, which can assist you in your gene expression studies.

RNA Methylation: Methods and Protocols

Автор: Lusser Alexandra
Название: RNA Methylation: Methods and Protocols
ISBN: 1493983040 ISBN-13(EAN): 9781493983049
Издательство: Springer
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Цена: 19564.00 р.
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Описание: This volume provides a comprehensive collection of current methods and protocols to study posttranscriptional base modifications in RNA with special focus on methylation.

3D DNA Nanostructure: Methods and Protocols

Автор: Ke Yonggang, Wang Pengfei
Название: 3D DNA Nanostructure: Methods and Protocols
ISBN: 1493982052 ISBN-13(EAN): 9781493982059
Издательство: Springer
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Цена: 15372.00 р.
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Описание:

Part I: DNA/RNA Structure Design

1. Designed 3D DNA Crystals

Nadrian C. Seeman, Ruojie Sha, Jens Birktoft, Jianping Zheng, Wenyan Liu, Tong Wang, and Chengde Mao

2. Three-Dimensional DNA Nanostructures Assembled from DNA Star Motifs

Cheng Tian and Chuan Zhang

3. Design of Wireframe DNA Nanostructures-DNA Gridiron

Dongran Han

4. Complex DNA Brick Assembly

Luvena Ong, Yonggang Ke, and Peng Yin

5. Computer-Aided Design of RNA Origami Structures

Steffen L. Sparvath, Cody W. Geary, and Ebbe S. Andersen

6. Assembling RNA Nanoparticles

Shou-Jun Xiao

Part II: Applications of DNA Structures

7. DNA Functionalization of Nanoparticles

Fang Lu and Oleg Gang

8. Purification Techniques for Three-Dimensional DNA Nanostructures

Travis A. Meyer

9. DNA Nanostructure as Smart Carriers for Drug Delivery

Xiangyuan Ouyang, Jie Chao, Shao Su, and Chunhai Fan

10. DNA G-Quadruplex-Based Assay of Enzyme Activity

Zhuoliang Liu, Kaiyu He, Wang Li, Xin Liu, Xiahong Xu, Zhou Nie, and Shouzhuo Yao

11. Assembly of Multi-Enzyme Cascade on a DNA Origami Nanostructure

Jinglin Fu and Tianran Li

12. Lipid Membrane Encapsulation of a 3D DNA NanoOctahedron

Steven D. Perrault and William M. Shih

13. DNA-PAINT Super-Resolution Imaging for Nucleic Acid Nanostructures

Mingjie Dai

14. Designing DNA Nanotube Liquid Crystals as a Weak-Alignment Medium for NMR Structure Determination of Membrane Proteins

John Min, William M. Shih, and Gaлtan Bellot

15. Direct Nanofabrication Using DNA Nanostructure

Feng Zhou and Haitao Liu

16. Confined Growth of Metal Nanoparticles Within 3D DNA Origami Molds

Wei Sun and Jie Shen

17. DNA-Directed Self-Assembly of Highly Ordered and Dense Single Walled Carbon Nanotube Arrays

Hareem Maune and Si-ping Han

18. A Proximity-Based Programmable DNA Nanoscale Assembly Line

Xiaoyan Zhang, Xiaoqiang Ding, Jianzhou Zou, and Hongzhou Gu

19. DNA Walkers as Transport Vehicles of Nanoparticles Along a Carbon Nanotube Track

Jing Pan, Tae-Gon Cha


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